BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015E08SP1|AL426863
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1369 1526 0.0
>3x_Contig1369
Length = 7461
Score = 1526 bits (767), Expect = 0.0
Identities = 796/807 (98%), Gaps = 1/807 (0%)
Strand = Plus / Plus
Query: 1 gatcttgaattggaattggaacaagctctamaaacagaaactactgatggttctataccg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1547 gatcttgaattggaattggaacaagctctacaaacagaaactactgatggttctataccg 1606
Query: 61 gcaagcatggttaatggaccggctggagcagcgatgtctacagatactggcagtgttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1607 gcaagcatggttaatggaccggctggagcagcgatgtctacagatactggcagtgttgta 1666
Query: 121 agaccaggacaacttcttgaggagaccggtgatgacgttgaacaagataacggtgatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 agaccaggacaacttcttgaggagaccggtgatgacgttgaacaagataacggtgatgat 1726
Query: 181 gaagacgaagaggaggaggacgaagaggaagaagaggaggaagaagaggatgaagaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 gaagacgaagaggaggaggacgaagaggaagaagaggaggaagaagaggatgaagaagag 1786
Query: 241 gaggatgaagagaacggtgctgatggattatccggatcagttacaacaggaacaactaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 gaggatgaagagaacggtgctgatggattatccggatcagttacaacaggaacaactaag 1846
Query: 301 tcacgtgtctcagacaacgatggtgctaacgaagaagagcaacacagagaattattactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1847 tcacgtgtctcagacaacgatggtgctaacgaagaagagcaacacagagaattattactt 1906
Query: 361 gatgaattgagggaactagaaagtacgttagaattaaaccggaataaagccagtaggact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907 gatgaattgagggaactagaaagtacgttagaattaaaccggaataaagccagtaggact 1966
Query: 421 acgaatccgttgttaaagacaagattcttagaaagtatcaagaagcttgagaaagaagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1967 acgaatccgttgttaaagacaagattcttagaaagtatcaagaagcttgagaaagaagtt 2026
Query: 481 gaattgaaacgaaaacagttaggagaaccagttgttgtagacgatgcaggaaatgtacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 gaattgaaacgaaaacagttaggagaaccagttgttgtagacgatgcaggaaatgtacag 2086
Query: 541 acagctcaagacatctcagaaaacgtacccgatactgaagccggtgcagtatcgaacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2087 acagctcaagacatctcagaaaacgtacccgatactgaagccggtgcagtatcgaacaag 2146
Query: 601 gccgcaatcagaaatggcagcgttagtagcggtggtagtggcgtaaccggatcggcatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2147 gccgcaatcagaaatggcagcgttagtagcggtggtagtggcgtaaccggatcggcatca 2206
Query: 661 attccaaacaatgctacgattaccaatggagtggaaaacattggtaccgaaggahatctt 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2207 attccaaacaatgctacgattaccaatggagtggaaaacattggtaccgaagga-atctt 2265
Query: 721 tatgaggaggaggatgaactagaagaagaggaagaagasgmgghggaggaagaggaggga 780
|||||||||||||||||||||||||||||||||||||| | || || ||||| |||| |
Sbjct: 2266 tatgaggaggaggatgaactagaagaagaggaagaagaggaggagggagaagaagaggaa 2325
Query: 781 gaagaagaggaagaagaagaggaagag 807
|||||||||||||| ||| ||||||||
Sbjct: 2326 gaagaagaggaagaggaacaggaagag 2352
Score = 352 bits (177), Expect = 6e-97
Identities = 206/211 (97%), Gaps = 4/211 (1%)
Strand = Plus / Plus
Query: 772 gaggagggagaagaagaggaagaagaagaggaagagga-caggaagagcaacggccggac 830
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2305 gaggagggagaagaagaggaagaagaagaggaagaggaacaggaagagcaacggccggac 2364
Query: 831 ga-gaaccgcaacaaggacaagaagcaagacaaggtactgaagaacttgatcaagatgac 889
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 gaagaaccgcaacaaggacaagaagcaagacaaggtactgaagaacttgatcaagatgac 2424
Query: 890 atggatatgatgcttcttttcggagcggataacgattaggtttgaactgagagaaaa-ra 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2425 atggatatgatgcttcttttcggagcggataacgattaggtttgaactgagagaaaagaa 2484
Query: 949 accactaaaag-aaaacaaaaacagaaaaaa 978
||||||||||| |||||||||||||||||||
Sbjct: 2485 accactaaaagaaaaacaaaaacagaaaaaa 2515
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,811
Number of Sequences: 1807
Number of extensions: 10811
Number of successful extensions: 692
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)